Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 AC154671.1-201ENSMUST00000228617 1578 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm12834-201ENSMUST00000121855 2829 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm44056-201ENSMUST00000204623 1427 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Svet1-201ENSMUST00000209370 3940 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm38198-201ENSMUST00000191772 3581 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm12014-201ENSMUST00000120164 1620 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm43398-201ENSMUST00000196584 2742 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm22133-201ENSMUST00000102082 109 ntBASIC1.6□□□□□ -2.15
Gm4559A4IF42 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Gm4559A4IF42 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms