Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Atxn1P54254 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.79□□□□□ -1.32
Atxn1P54254 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Atxn1P54254 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atxn1P54254 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.79□□□□□ -1.32
Atxn1P54254 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.79□□□□□ -1.32
Atxn1P54254 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Atxn1P54254 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Atxn1P54254 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.78□□□□□ -1.32
Atxn1P54254 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Snord88a-201ENSMUST00000116723 90 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm12710-201ENSMUST00000119011 216 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm5793-201ENSMUST00000119393 630 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm6451-201ENSMUST00000121488 717 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm24286-201ENSMUST00000157632 128 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm25904-201ENSMUST00000158491 143 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.78□□□□□ -1.32
Atxn1P54254 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm23968-201ENSMUST00000175047 125 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm2058-201ENSMUST00000178791 560 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm27005-201ENSMUST00000182783 921 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Mir7220-201ENSMUST00000183978 60 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm6077-201ENSMUST00000196008 499 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm8190-201ENSMUST00000199603 586 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm42673-201ENSMUST00000202676 337 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm34272-201ENSMUST00000208886 253 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.78□□□□□ -1.32
Atxn1P54254 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Gm5928-201ENSMUST00000221839 466 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.78□□□□□ -1.32
Atxn1P54254 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atxn1P54254 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atxn1P54254 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Atxn1P54254 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Atxn1P54254 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Atxn1P54254 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Atxn1P54254 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.77□□□□□ -1.33
Atxn1P54254 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Atxn1P54254 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Atxn1P54254 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Atxn1P54254 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.77□□□□□ -1.33
Atxn1P54254 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Atxn1P54254 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.77□□□□□ -1.33
Atxn1P54254 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms