Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm43836-201ENSMUST00000196532 381 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm42634-201ENSMUST00000197362 381 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm44382-201ENSMUST00000198683 122 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm5306-201ENSMUST00000203325 757 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm15763-201ENSMUST00000120136 403 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm4852-201ENSMUST00000121202 729 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm29755-201ENSMUST00000196976 948 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm2225-201ENSMUST00000209570 377 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Retreg1-203ENSMUST00000226438 2783 ntBASIC6.24□□□□□ -1.41
Col6a3E9PWQ3 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms