Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Gm43681-201ENSMUST00000201581 1903 ntBASIC3.57□□□□□ -1.84
Herc1E9PZP8 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Herc1E9PZP8 Gm7609-204ENSMUST00000161424 461 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm46191-201ENSMUST00000218899 433 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm8750-201ENSMUST00000173278 1537 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm42662-201ENSMUST00000202539 1431 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm44117-201ENSMUST00000204442 1758 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm11743-201ENSMUST00000117385 1735 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Klf10-202ENSMUST00000226363 2917 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm14783-201ENSMUST00000118900 663 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm13259-201ENSMUST00000120792 456 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm11385-201ENSMUST00000121513 570 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm9687-201ENSMUST00000189312 602 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm8039-201ENSMUST00000204758 712 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm44416-201ENSMUST00000204055 2066 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm20796-201ENSMUST00000180355 5838 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm24444-201ENSMUST00000157244 308 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm23023-201ENSMUST00000158767 109 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm6717-201ENSMUST00000185549 838 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm37920-201ENSMUST00000192952 749 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm17951-201ENSMUST00000198536 496 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm43222-201ENSMUST00000199013 603 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm19900-201ENSMUST00000207285 576 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm44750-201ENSMUST00000206185 2223 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC136019.1-201ENSMUST00000226503 1412 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC3.56□□□□□ -1.84
Herc1E9PZP8 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Herc1E9PZP8 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms