Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AW822073-201ENSMUST00000075305 555 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Mir296-201ENSMUST00000083587 79 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm15310-201ENSMUST00000117891 372 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm14900-201ENSMUST00000120304 733 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm14070-201ENSMUST00000120773 428 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm13462-201ENSMUST00000121472 961 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm11545-201ENSMUST00000146507 375 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm43689-201ENSMUST00000195951 427 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm42782-201ENSMUST00000197286 522 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lima1Q9ERG0 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lima1Q9ERG0 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm11517-201ENSMUST00000119491 387 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm24680-201ENSMUST00000158759 126 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm9672-201ENSMUST00000166437 425 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm21392-201ENSMUST00000182950 972 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm35323-201ENSMUST00000191836 499 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm9419-201ENSMUST00000200672 567 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm44112-201ENSMUST00000204787 372 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms