Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm24790-201ENSMUST00000104285 132 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm11504-201ENSMUST00000120211 173 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm20454-201ENSMUST00000172713 221 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm23968-201ENSMUST00000175047 125 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Mir6337-201ENSMUST00000184194 105 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43576-201ENSMUST00000197937 871 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Upf3bQ3ULL6 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm14733-201ENSMUST00000117680 133 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm11498-201ENSMUST00000120660 949 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm5843-201ENSMUST00000121631 476 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm25550-201ENSMUST00000158079 128 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm23071-201ENSMUST00000158242 115 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm5928-201ENSMUST00000221839 466 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.01□□□□□ -1.29
Upf3bQ3ULL6 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm14896-201ENSMUST00000121311 1351 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm10845-202ENSMUST00000228217 3389 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Rnu11-201ENSMUST00000104135 134 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms