Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm11854-201ENSMUST00000117839 446 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm5601-201ENSMUST00000118909 972 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm13224-201ENSMUST00000119586 94 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm16057-201ENSMUST00000120811 759 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm11341-201ENSMUST00000122316 447 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm16359-201ENSMUST00000124511 289 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm25117-201ENSMUST00000157194 144 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm24190-201ENSMUST00000157976 216 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm25556-201ENSMUST00000158077 144 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm5871-201ENSMUST00000176461 718 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm27014-201ENSMUST00000182658 937 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm7266-201ENSMUST00000187999 405 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm7452-201ENSMUST00000200764 788 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm17995-201ENSMUST00000209266 530 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm9118-201ENSMUST00000219246 754 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 CT009600.2-201ENSMUST00000226638 481 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm22575-201ENSMUST00000082981 110 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm37109-201ENSMUST00000195475 2254 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col8a1Q00780 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 AC159301.1-202ENSMUST00000225860 2133 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm22370-201ENSMUST00000102422 83 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm15185-201ENSMUST00000117397 746 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm12225-201ENSMUST00000117995 298 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm15421-202ENSMUST00000118224 399 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm14795-201ENSMUST00000118461 471 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm2735-201ENSMUST00000136133 277 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm2860-201ENSMUST00000199226 707 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm44253-201ENSMUST00000203387 628 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm44091-201ENSMUST00000205212 649 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms