Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HttP42859 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.68□□□□□ -1.34
HttP42859 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HttP42859 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm43254-201ENSMUST00000199187 2491 ntBASIC6.68□□□□□ -1.34
HttP42859 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.68□□□□□ -1.34
HttP42859 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm13866-201ENSMUST00000118901 968 ntBASIC6.67□□□□□ -1.34
HttP42859 Olfr331-202ENSMUST00000170501 957 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm26381-201ENSMUST00000174895 92 ntBASIC6.67□□□□□ -1.34
HttP42859 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.67□□□□□ -1.34
HttP42859 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.67□□□□□ -1.34
HttP42859 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.67□□□□□ -1.34
HttP42859 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HttP42859 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HttP42859 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.67□□□□□ -1.34
HttP42859 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HttP42859 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
HttP42859 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.67□□□□□ -1.34
HttP42859 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.67□□□□□ -1.34
HttP42859 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.67□□□□□ -1.34
HttP42859 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.67□□□□□ -1.34
HttP42859 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.67□□□□□ -1.34
HttP42859 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.67□□□□□ -1.34
HttP42859 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HttP42859 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm44982-201ENSMUST00000208795 471 ntBASIC6.67□□□□□ -1.34
HttP42859 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HttP42859 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.67□□□□□ -1.34
HttP42859 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.67□□□□□ -1.34
HttP42859 Gm22492-201ENSMUST00000157192 297 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm23233-201ENSMUST00000157301 137 ntBASIC6.67□□□□□ -1.34
HttP42859 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm27875-201ENSMUST00000184425 123 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm43160-201ENSMUST00000196453 421 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm38670-201ENSMUST00000199248 77 ntBASIC6.67□□□□□ -1.34
HttP42859 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
HttP42859 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.67□□□□□ -1.34
HttP42859 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HttP42859 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HttP42859 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HttP42859 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HttP42859 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HttP42859 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Gm25534-201ENSMUST00000175365 125 ntBASIC6.66□□□□□ -1.34
HttP42859 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.66□□□□□ -1.34
HttP42859 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HttP42859 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.66□□□□□ -1.34
HttP42859 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HttP42859 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HttP42859 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HttP42859 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 181.1 ms