Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm7146-201ENSMUST00000116079 739 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm15016-201ENSMUST00000117300 720 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm15078-201ENSMUST00000118371 782 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm12901-201ENSMUST00000118690 532 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm6472-201ENSMUST00000178147 651 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm8009-201ENSMUST00000191672 436 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm37609-201ENSMUST00000191778 678 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm38131-201ENSMUST00000192449 430 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm43235-201ENSMUST00000200121 297 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.68□□□□□ -1.18
Col1a1P11087 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col1a1P11087 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.68□□□□□ -1.18
Col1a1P11087 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.68□□□□□ -1.18
Col1a1P11087 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Col1a1P11087 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Col1a1P11087 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm13626-201ENSMUST00000119435 402 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.68□□□□□ -1.18
Col1a1P11087 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm25487-201ENSMUST00000158725 125 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm16164-201ENSMUST00000160078 468 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm8582-201ENSMUST00000164061 789 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm27219-201ENSMUST00000184633 742 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm27970-201ENSMUST00000184854 407 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm20926-201ENSMUST00000194457 696 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm8869-201ENSMUST00000195222 947 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm45850-201ENSMUST00000212536 338 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm9321-201ENSMUST00000221179 778 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Gm9292-201ENSMUST00000222008 710 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.68□□□□□ -1.18
Col1a1P11087 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col1a1P11087 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.67□□□□□ -1.18
Col1a1P11087 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms