Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps53Q8CCB4 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm12573-201ENSMUST00000118158 286 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm12778-201ENSMUST00000122341 333 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm25395-201ENSMUST00000157343 272 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm24781-201ENSMUST00000157636 117 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm22552-201ENSMUST00000157796 337 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm26570-201ENSMUST00000180672 342 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm28958-201ENSMUST00000185864 703 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm44342-201ENSMUST00000196874 129 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm44383-201ENSMUST00000198940 129 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm44565-201ENSMUST00000208194 269 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm5374-202ENSMUST00000222910 314 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 AC158388.1-201ENSMUST00000225441 256 ntBASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Vps53Q8CCB4 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Vps53Q8CCB4 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.84□□□□□ -1.16
Vps53Q8CCB4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Vps53Q8CCB4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 AC163296.2-201ENSMUST00000220177 1315 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm6382-201ENSMUST00000118873 942 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm24286-201ENSMUST00000157632 128 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm27602-201ENSMUST00000183861 111 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm45279-201ENSMUST00000210315 391 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm22684-201ENSMUST00000082849 132 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps53Q8CCB4 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms