Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm12608-201ENSMUST00000122013 1715 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm25379-201ENSMUST00000104338 114 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm25848-201ENSMUST00000116790 144 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm11796-201ENSMUST00000120208 972 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm15164-201ENSMUST00000122203 271 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm23317-201ENSMUST00000157999 129 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a1Q00780 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm43090-201ENSMUST00000202459 314 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm44896-201ENSMUST00000206190 772 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm5514-201ENSMUST00000060477 306 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a1Q00780 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col8a1Q00780 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.25□□□□□ -1.41
Col8a1Q00780 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a1Q00780 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.24□□□□□ -1.41
Col8a1Q00780 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col8a1Q00780 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms