Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5538W4VSP6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Tgds-204ENSMUST00000228543 1594 ntBASIC18.57■□□□□ 0.56
Gm5538W4VSP6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5538W4VSP6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5538W4VSP6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm5538W4VSP6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm5538W4VSP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.53■□□□□ 0.56
Gm5538W4VSP6 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5538W4VSP6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Gm29257-201ENSMUST00000186115 639 ntBASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Gm5408-201ENSMUST00000197998 747 ntBASIC18.52■□□□□ 0.56
Gm5538W4VSP6 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms