Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PdfS4R2K0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PdfS4R2K0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PdfS4R2K0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.94□□□□□ -0.18
PdfS4R2K0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
PdfS4R2K0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.94□□□□□ -0.18
PdfS4R2K0 Gm43137-201ENSMUST00000198052 594 ntBASIC13.94□□□□□ -0.18
PdfS4R2K0 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.94□□□□□ -0.18
PdfS4R2K0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
PdfS4R2K0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PdfS4R2K0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PdfS4R2K0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.93□□□□□ -0.18
PdfS4R2K0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.93□□□□□ -0.18
PdfS4R2K0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.93□□□□□ -0.18
PdfS4R2K0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.93□□□□□ -0.18
PdfS4R2K0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PdfS4R2K0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PdfS4R2K0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.92□□□□□ -0.18
PdfS4R2K0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.92□□□□□ -0.18
PdfS4R2K0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PdfS4R2K0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PdfS4R2K0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PdfS4R2K0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.91□□□□□ -0.18
PdfS4R2K0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.91□□□□□ -0.18
PdfS4R2K0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PdfS4R2K0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms