Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.14■□□□□ 0.5
Mrpl40Q9Z2Q5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mrpl40Q9Z2Q5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm13168-201ENSMUST00000121771 632 ntBASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Mrpl40Q9Z2Q5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl40Q9Z2Q5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl40Q9Z2Q5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm37856-201ENSMUST00000191634 999 ntBASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Rab3c-203ENSMUST00000224180 967 ntBASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl40Q9Z2Q5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm26524-201ENSMUST00000192339 390 ntBASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Trmt13-210ENSMUST00000198454 880 ntBASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl40Q9Z2Q5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrpl40Q9Z2Q5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrpl40Q9Z2Q5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrpl40Q9Z2Q5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.09■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Mrpl40Q9Z2Q5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms