Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn3Q9Z0G9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn3Q9Z0G9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cldn3Q9Z0G9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn3Q9Z0G9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn3Q9Z0G9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn3Q9Z0G9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn3Q9Z0G9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn3Q9Z0G9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn3Q9Z0G9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn3Q9Z0G9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Cldn3Q9Z0G9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms