Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ClcnkaQ9WUB7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClcnkaQ9WUB7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClcnkaQ9WUB7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClcnkaQ9WUB7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.69■□□□□ 0.26
ClcnkaQ9WUB7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Gm37179-201ENSMUST00000194862 823 ntBASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ClcnkaQ9WUB7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms