Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh17Q9R100 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh17Q9R100 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh17Q9R100 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh17Q9R100 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh17Q9R100 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.73■□□□□ 0.43
Cdh17Q9R100 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.73■□□□□ 0.43
Cdh17Q9R100 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.73■□□□□ 0.43
Cdh17Q9R100 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.73■□□□□ 0.43
Cdh17Q9R100 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.73■□□□□ 0.43
Cdh17Q9R100 Gm10493-201ENSMUST00000097270 612 ntBASIC17.73■□□□□ 0.43
Cdh17Q9R100 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh17Q9R100 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh17Q9R100 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Nespas-201ENSMUST00000143738 1083 ntBASIC17.72■□□□□ 0.43
Cdh17Q9R100 Gm6420-201ENSMUST00000193885 723 ntBASIC17.72■□□□□ 0.43
Cdh17Q9R100 Gm42778-201ENSMUST00000199644 553 ntBASIC17.72■□□□□ 0.43
Cdh17Q9R100 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh17Q9R100 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.71■□□□□ 0.43
Cdh17Q9R100 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Gm22325-201ENSMUST00000158904 308 ntBASIC17.71■□□□□ 0.43
Cdh17Q9R100 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.71■□□□□ 0.43
Cdh17Q9R100 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh17Q9R100 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Cdh17Q9R100 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdh17Q9R100 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdh17Q9R100 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh17Q9R100 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.68■□□□□ 0.42
Cdh17Q9R100 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh17Q9R100 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Cdh17Q9R100 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.67■□□□□ 0.42
Cdh17Q9R100 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdh17Q9R100 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms