Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.35■□□□□ 0.85
Chaf1aQ9QWF0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chaf1aQ9QWF0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chaf1aQ9QWF0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.33■□□□□ 0.84
Chaf1aQ9QWF0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.32■□□□□ 0.84
Chaf1aQ9QWF0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chaf1aQ9QWF0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chaf1aQ9QWF0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chaf1aQ9QWF0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms