Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.29■■□□□ 1.48
SH2D4AQ9H788 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 AC007322.3-201ENST00000426526 701 ntBASIC24.28■■□□□ 1.48
SH2D4AQ9H788 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH2D4AQ9H788 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 CYP2T3P-201ENST00000601990 817 ntBASIC24.27■■□□□ 1.48
SH2D4AQ9H788 GUSBP5-202ENST00000510805 1989 ntBASIC24.27■■□□□ 1.48
SH2D4AQ9H788 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SH2D4AQ9H788 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 MCRIP2P1-201ENST00000394346 511 ntBASIC24.26■■□□□ 1.47
SH2D4AQ9H788 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH2D4AQ9H788 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH2D4AQ9H788 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AL589743.5-201ENST00000616611 1050 ntBASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SH2D4AQ9H788 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 AL355472.2-201ENST00000422958 438 ntBASIC24.23■■□□□ 1.47
SH2D4AQ9H788 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 ITM2C-210ENST00000620962 501 ntBASIC24.23■■□□□ 1.47
SH2D4AQ9H788 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SH2D4AQ9H788 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms