Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Reep4-203ENSMUST00000226563 1444 ntBASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim39Q9ESN2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim39Q9ESN2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim39Q9ESN2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim39Q9ESN2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.91■□□□□ 0.3
Trim39Q9ESN2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.91■□□□□ 0.3
Trim39Q9ESN2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Gm10493-201ENSMUST00000097270 612 ntBASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim39Q9ESN2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms