Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
Rtl8cQ9D6I0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Nespas-201ENSMUST00000143738 1083 ntBASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtl8cQ9D6I0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rtl8cQ9D6I0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rtl8cQ9D6I0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtl8cQ9D6I0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtl8cQ9D6I0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtl8cQ9D6I0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Gm10849-201ENSMUST00000100397 618 ntBASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.25■□□□□ 0.19
Rtl8cQ9D6I0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtl8cQ9D6I0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl8cQ9D6I0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms