Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Gm5417-201ENSMUST00000079706 384 ntBASIC15.92■□□□□ 0.14
Scrt1Q99M85 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scrt1Q99M85 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.91■□□□□ 0.14
Scrt1Q99M85 Mir5122-201ENSMUST00000175004 89 ntBASIC15.91■□□□□ 0.14
Scrt1Q99M85 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scrt1Q99M85 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.9■□□□□ 0.14
Scrt1Q99M85 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Scrt1Q99M85 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.9■□□□□ 0.14
Scrt1Q99M85 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.9■□□□□ 0.14
Scrt1Q99M85 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.9■□□□□ 0.14
Scrt1Q99M85 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.9■□□□□ 0.14
Scrt1Q99M85 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scrt1Q99M85 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Gm13158-201ENSMUST00000122007 736 ntBASIC15.89■□□□□ 0.13
Scrt1Q99M85 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scrt1Q99M85 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Gm6433-201ENSMUST00000118634 875 ntBASIC15.88■□□□□ 0.13
Scrt1Q99M85 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scrt1Q99M85 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms