Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.89■□□□□ 0.93
Smc1bQ920F6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc1bQ920F6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smc1bQ920F6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Gm2399-201ENSMUST00000104944 225 ntBASIC20.88■□□□□ 0.93
Smc1bQ920F6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.88■□□□□ 0.93
Smc1bQ920F6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc1bQ920F6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.87■□□□□ 0.93
Smc1bQ920F6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.87■□□□□ 0.93
Smc1bQ920F6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.87■□□□□ 0.93
Smc1bQ920F6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc1bQ920F6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc1bQ920F6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.85■□□□□ 0.93
Smc1bQ920F6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1bQ920F6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Gm13158-201ENSMUST00000122007 736 ntBASIC20.84■□□□□ 0.93
Smc1bQ920F6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1bQ920F6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.83■□□□□ 0.93
Smc1bQ920F6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1bQ920F6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Smc1bQ920F6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.83■□□□□ 0.92
Smc1bQ920F6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms