Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb18Q91Y02 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb18Q91Y02 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb18Q91Y02 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb18Q91Y02 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Mtag2-201ENSMUST00000058665 714 ntBASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb18Q91Y02 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Zfp783-201ENSMUST00000095946 670 ntBASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb18Q91Y02 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms