Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb5Q91XX5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Mir5122-201ENSMUST00000175004 89 ntBASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb5Q91XX5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm43183-201ENSMUST00000200632 547 ntBASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb5Q91XX5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Gm18025-201ENSMUST00000221733 862 ntBASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhgb5Q91XX5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb5Q91XX5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb5Q91XX5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb5Q91XX5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb5Q91XX5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Gm11643-201ENSMUST00000119578 864 ntBASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Gm5417-201ENSMUST00000079706 384 ntBASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb5Q91XX5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms