Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Trim60Q8VI40 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.85■□□□□ 0.61
Trim60Q8VI40 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Trim60Q8VI40 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim60Q8VI40 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim60Q8VI40 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.84■□□□□ 0.61
Trim60Q8VI40 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim60Q8VI40 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim60Q8VI40 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim60Q8VI40 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Gm13534-201ENSMUST00000121169 513 ntBASIC18.82■□□□□ 0.6
Trim60Q8VI40 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.82■□□□□ 0.6
Trim60Q8VI40 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim60Q8VI40 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Reep4-203ENSMUST00000226563 1444 ntBASIC18.81■□□□□ 0.6
Trim60Q8VI40 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.81■□□□□ 0.6
Trim60Q8VI40 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim60Q8VI40 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim60Q8VI40 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms