Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdhr1Q8VHP6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdhr1Q8VHP6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Mir1199-201ENSMUST00000117015 119 ntBASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cdhr1Q8VHP6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdhr1Q8VHP6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdhr1Q8VHP6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.71■□□□□ 0.42
Cdhr1Q8VHP6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdhr1Q8VHP6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdhr1Q8VHP6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdhr1Q8VHP6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cdhr1Q8VHP6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr1Q8VHP6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms