Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp33Q8R5K2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Timm23-208ENSMUST00000226683 750 ntBASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp33Q8R5K2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp33Q8R5K2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.89■□□□□ 0.94
Usp33Q8R5K2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp33Q8R5K2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp33Q8R5K2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp33Q8R5K2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Gm3375-201ENSMUST00000203929 796 ntBASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Odf3b-204ENSMUST00000227834 930 ntBASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp33Q8R5K2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Gm38285-201ENSMUST00000192928 922 ntBASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp33Q8R5K2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Gm6659-201ENSMUST00000174752 547 ntBASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp33Q8R5K2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms