Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3kbp1Q8R550 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3kbp1Q8R550 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3kbp1Q8R550 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3kbp1Q8R550 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sh3kbp1Q8R550 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3kbp1Q8R550 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Sh3kbp1Q8R550 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms