Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Gm44549-201ENSMUST00000208351 577 ntBASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.73■□□□□ 0.27
Vmn1r28Q8R2C9 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Gm22325-201ENSMUST00000158904 308 ntBASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r28Q8R2C9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vmn1r28Q8R2C9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vmn1r28Q8R2C9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vmn1r28Q8R2C9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r28Q8R2C9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r28Q8R2C9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Gm12896-201ENSMUST00000118430 226 ntBASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r28Q8R2C9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms