Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.19■□□□□ 0.5
Nudcd3Q8R1N4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nudcd3Q8R1N4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nudcd3Q8R1N4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nudcd3Q8R1N4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Mir7075-201ENSMUST00000184187 82 ntBASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nudcd3Q8R1N4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nudcd3Q8R1N4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nudcd3Q8R1N4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nudcd3Q8R1N4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Nudcd3Q8R1N4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nudcd3Q8R1N4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms