Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.4□□□□□ -0.58
Cystm1Q8K353 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cystm1Q8K353 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.4□□□□□ -0.59
Cystm1Q8K353 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cystm1Q8K353 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.4□□□□□ -0.59
Cystm1Q8K353 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Mir7075-201ENSMUST00000184187 82 ntBASIC11.39□□□□□ -0.59
Cystm1Q8K353 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.39□□□□□ -0.59
Cystm1Q8K353 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.39□□□□□ -0.59
Cystm1Q8K353 AC166356.1-201ENSMUST00000228236 1426 ntBASIC11.39□□□□□ -0.59
Cystm1Q8K353 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cystm1Q8K353 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.38□□□□□ -0.59
Cystm1Q8K353 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cystm1Q8K353 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms