Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Gm22325-201ENSMUST00000158904 308 ntBASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Gm6420-201ENSMUST00000193885 723 ntBASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cchcr1Q8K2I2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cchcr1Q8K2I2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cchcr1Q8K2I2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Gm10033-202ENSMUST00000211874 928 ntBASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.48■■□□□ 1.03
Cchcr1Q8K2I2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Fst-202ENSMUST00000223640 2612 ntBASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Nespas-201ENSMUST00000143738 1083 ntBASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Gm7514-201ENSMUST00000209475 934 ntBASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Gm18671-201ENSMUST00000214826 683 ntBASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cchcr1Q8K2I2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cchcr1Q8K2I2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cchcr1Q8K2I2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cchcr1Q8K2I2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms