Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd3Q8CIK8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd3Q8CIK8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd3Q8CIK8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd3Q8CIK8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd3Q8CIK8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd3Q8CIK8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd3Q8CIK8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rfwd3Q8CIK8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd3Q8CIK8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms