Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps50Q8CI71 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps50Q8CI71 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps50Q8CI71 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps50Q8CI71 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps50Q8CI71 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps50Q8CI71 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps50Q8CI71 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps50Q8CI71 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.82■□□□□ 0.44
Vps50Q8CI71 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.82■□□□□ 0.44
Vps50Q8CI71 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps50Q8CI71 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps50Q8CI71 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.81■□□□□ 0.44
Vps50Q8CI71 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vps50Q8CI71 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps50Q8CI71 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms