Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc2Q8CG48 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc2Q8CG48 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc2Q8CG48 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smc2Q8CG48 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smc2Q8CG48 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Smc2Q8CG48 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Gm18284-201ENSMUST00000172604 624 ntBASIC20.82■□□□□ 0.92
Smc2Q8CG48 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc2Q8CG48 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.81■□□□□ 0.92
Smc2Q8CG48 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc2Q8CG48 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc2Q8CG48 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc2Q8CG48 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.8■□□□□ 0.92
Smc2Q8CG48 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.79■□□□□ 0.92
Smc2Q8CG48 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc2Q8CG48 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.78■□□□□ 0.92
Smc2Q8CG48 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc2Q8CG48 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.78■□□□□ 0.92
Smc2Q8CG48 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Gm22325-201ENSMUST00000158904 308 ntBASIC20.77■□□□□ 0.92
Smc2Q8CG48 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc2Q8CG48 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.77■□□□□ 0.92
Smc2Q8CG48 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc2Q8CG48 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Smc2Q8CG48 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.76■□□□□ 0.91
Smc2Q8CG48 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc2Q8CG48 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms