Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.58■■□□□ 1.04
Ccdc178Q8CDV0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc178Q8CDV0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.58■■□□□ 1.04
Ccdc178Q8CDV0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc178Q8CDV0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc178Q8CDV0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.56■■□□□ 1.04
Ccdc178Q8CDV0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc178Q8CDV0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc178Q8CDV0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Gm10653-202ENSMUST00000139570 835 ntBASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.53■■□□□ 1.04
Ccdc178Q8CDV0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc178Q8CDV0 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.52■■□□□ 1.03
Ccdc178Q8CDV0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc178Q8CDV0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Rab3c-203ENSMUST00000224180 967 ntBASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc178Q8CDV0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms