Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Gm15375-201ENSMUST00000119510 849 ntBASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.47■□□□□ 0.07
Smg1Q8BKX6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smg1Q8BKX6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smg1Q8BKX6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smg1Q8BKX6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smg1Q8BKX6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smg1Q8BKX6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smg1Q8BKX6 Gm25016-201ENSMUST00000158399 131 ntBASIC15.46■□□□□ 0.06
Smg1Q8BKX6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smg1Q8BKX6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smg1Q8BKX6 Golph3-205ENSMUST00000228671 2842 ntBASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Gm27704-201ENSMUST00000185094 107 ntBASIC15.45■□□□□ 0.06
Smg1Q8BKX6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gm24589-201ENSMUST00000116692 94 ntBASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gm37292-201ENSMUST00000192062 758 ntBASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smg1Q8BKX6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smg1Q8BKX6 Gm11927-201ENSMUST00000118472 759 ntBASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Gm12382-201ENSMUST00000122005 922 ntBASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smg1Q8BKX6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms