Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3tc2Q80VA5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sh3tc2Q80VA5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3tc2Q80VA5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.77■□□□□ 0.75
Sh3tc2Q80VA5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sh3tc2Q80VA5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Flg-201ENSMUST00000050758 1488 ntBASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3tc2Q80VA5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3tc2Q80VA5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sh3tc2Q80VA5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3tc2Q80VA5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms