Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RfflQ6ZQM0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RfflQ6ZQM0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RfflQ6ZQM0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.62■□□□□ 0.41
RfflQ6ZQM0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RfflQ6ZQM0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.61■□□□□ 0.41
RfflQ6ZQM0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RfflQ6ZQM0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms