Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ssx9Q6XAS3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssx9Q6XAS3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.09■□□□□ 0.49
Ssx9Q6XAS3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssx9Q6XAS3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssx9Q6XAS3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssx9Q6XAS3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssx9Q6XAS3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ssx9Q6XAS3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssx9Q6XAS3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssx9Q6XAS3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms