Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cachd1Q6PDJ1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cachd1Q6PDJ1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cachd1Q6PDJ1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cachd1Q6PDJ1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cachd1Q6PDJ1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cachd1Q6PDJ1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Gm11927-201ENSMUST00000118472 759 ntBASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Gm10576-201ENSMUST00000191927 825 ntBASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cachd1Q6PDJ1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cachd1Q6PDJ1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cachd1Q6PDJ1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Mir8098-201ENSMUST00000184011 137 ntBASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cachd1Q6PDJ1 Gm5864-201ENSMUST00000202263 970 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms