Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtl3Q6P1Y1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Gm44549-201ENSMUST00000208351 577 ntBASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.82■□□□□ 0.6
Rtl3Q6P1Y1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Gm22325-201ENSMUST00000158904 308 ntBASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl3Q6P1Y1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtl3Q6P1Y1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl3Q6P1Y1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl3Q6P1Y1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Trmt13-210ENSMUST00000198454 880 ntBASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl3Q6P1Y1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Rtl3Q6P1Y1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtl3Q6P1Y1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtl3Q6P1Y1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtl3Q6P1Y1 Gm2559-201ENSMUST00000201323 363 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms