Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1eQ61290 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1eQ61290 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1eQ61290 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.96■□□□□ 0.46
Cacna1eQ61290 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1eQ61290 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cacna1eQ61290 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1eQ61290 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1eQ61290 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1eQ61290 Mir2861-201ENSMUST00000175539 82 ntBASIC17.95■□□□□ 0.46
Cacna1eQ61290 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1eQ61290 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Gm18032-201ENSMUST00000222541 538 ntBASIC17.93■□□□□ 0.46
Cacna1eQ61290 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1eQ61290 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.92■□□□□ 0.46
Cacna1eQ61290 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1eQ61290 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.92■□□□□ 0.46
Cacna1eQ61290 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cacna1eQ61290 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.91■□□□□ 0.46
Cacna1eQ61290 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1eQ61290 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.91■□□□□ 0.46
Cacna1eQ61290 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1eQ61290 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1eQ61290 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1eQ61290 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1eQ61290 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1eQ61290 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.89■□□□□ 0.45
Cacna1eQ61290 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.89■□□□□ 0.45
Cacna1eQ61290 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Gm7367-201ENSMUST00000057611 492 ntBASIC17.89■□□□□ 0.45
Cacna1eQ61290 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.89■□□□□ 0.45
Cacna1eQ61290 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cacna1eQ61290 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.88■□□□□ 0.45
Cacna1eQ61290 Gm23634-201ENSMUST00000175071 91 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms