Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc6a4Q60857 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a4Q60857 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a4Q60857 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a4Q60857 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.66■□□□□ 0.58
Slc6a4Q60857 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Slc6a4Q60857 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc6a4Q60857 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Slc6a4Q60857 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Slc6a4Q60857 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a4Q60857 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slc6a4Q60857 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a4Q60857 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.64■□□□□ 0.57
Slc6a4Q60857 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a4Q60857 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Gm15378-201ENSMUST00000121894 207 ntBASIC18.63■□□□□ 0.57
Slc6a4Q60857 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.63■□□□□ 0.57
Slc6a4Q60857 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Slc6a4Q60857 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.63■□□□□ 0.57
Slc6a4Q60857 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a4Q60857 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc6a4Q60857 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.61■□□□□ 0.57
Slc6a4Q60857 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a4Q60857 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.61■□□□□ 0.57
Slc6a4Q60857 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a4Q60857 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.6■□□□□ 0.57
Slc6a4Q60857 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.6■□□□□ 0.57
Slc6a4Q60857 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a4Q60857 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Gm10138-203ENSMUST00000206952 366 ntBASIC18.59■□□□□ 0.57
Slc6a4Q60857 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.59■□□□□ 0.57
Slc6a4Q60857 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a4Q60857 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a4Q60857 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Slc6a4Q60857 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Slc6a4Q60857 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a4Q60857 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a4Q60857 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Slc6a4Q60857 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms