Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pkd1l3Q2EG98 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Flg-201ENSMUST00000050758 1488 ntBASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pkd1l3Q2EG98 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pkd1l3Q2EG98 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gm18666-201ENSMUST00000190039 958 ntBASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pkd1l3Q2EG98 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pkd1l3Q2EG98 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pkd1l3Q2EG98 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pkd1l3Q2EG98 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.27■□□□□ 0.2
Pkd1l3Q2EG98 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms