Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Rab3c-203ENSMUST00000224180 967 ntBASIC18.78■□□□□ 0.6
Vps45P97390 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps45P97390 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps45P97390 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps45P97390 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps45P97390 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps45P97390 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vps45P97390 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps45P97390 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vps45P97390 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.77■□□□□ 0.6
Vps45P97390 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps45P97390 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vps45P97390 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps45P97390 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vps45P97390 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Vps45P97390 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps45P97390 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps45P97390 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Vps45P97390 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vps45P97390 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps45P97390 Gm6576-201ENSMUST00000169678 883 ntBASIC18.75■□□□□ 0.59
Vps45P97390 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps45P97390 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps45P97390 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps45P97390 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Vps45P97390 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps45P97390 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Vps45P97390 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Vps45P97390 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps45P97390 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps45P97390 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.73■□□□□ 0.59
Vps45P97390 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps45P97390 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.73■□□□□ 0.59
Vps45P97390 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps45P97390 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps45P97390 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps45P97390 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps45P97390 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.72■□□□□ 0.59
Vps45P97390 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps45P97390 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps45P97390 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps45P97390 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps45P97390 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vps45P97390 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.71■□□□□ 0.59
Vps45P97390 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps45P97390 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms