Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.74■□□□□ 0.75
CiitaP79621 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.74■□□□□ 0.75
CiitaP79621 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.74■□□□□ 0.75
CiitaP79621 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CiitaP79621 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.74■□□□□ 0.75
CiitaP79621 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CiitaP79621 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.73■□□□□ 0.75
CiitaP79621 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CiitaP79621 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CiitaP79621 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
CiitaP79621 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CiitaP79621 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CiitaP79621 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.72■□□□□ 0.75
CiitaP79621 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CiitaP79621 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.72■□□□□ 0.75
CiitaP79621 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CiitaP79621 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CiitaP79621 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CiitaP79621 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.71■□□□□ 0.75
CiitaP79621 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.71■□□□□ 0.75
CiitaP79621 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.71■□□□□ 0.75
CiitaP79621 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CiitaP79621 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CiitaP79621 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Gm15375-201ENSMUST00000119510 849 ntBASIC19.7■□□□□ 0.74
CiitaP79621 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CiitaP79621 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CiitaP79621 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.69■□□□□ 0.74
CiitaP79621 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CiitaP79621 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CiitaP79621 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.69■□□□□ 0.74
CiitaP79621 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.69■□□□□ 0.74
CiitaP79621 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CiitaP79621 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CiitaP79621 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CiitaP79621 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CiitaP79621 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CiitaP79621 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.68■□□□□ 0.74
CiitaP79621 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.68■□□□□ 0.74
CiitaP79621 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.68■□□□□ 0.74
CiitaP79621 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CiitaP79621 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CiitaP79621 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CiitaP79621 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CiitaP79621 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms