Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cks1bP61025 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1bP61025 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cks1bP61025 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Cks1bP61025 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cks1bP61025 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cks1bP61025 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.95□□□□□ -0.34
Cks1bP61025 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.95□□□□□ -0.34
Cks1bP61025 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Gm15820-201ENSMUST00000201566 728 ntBASIC12.95□□□□□ -0.34
Cks1bP61025 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.95□□□□□ -0.34
Cks1bP61025 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cks1bP61025 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.94□□□□□ -0.34
Cks1bP61025 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cks1bP61025 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cks1bP61025 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cks1bP61025 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.94□□□□□ -0.34
Cks1bP61025 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.94□□□□□ -0.34
Cks1bP61025 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cks1bP61025 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.94□□□□□ -0.34
Cks1bP61025 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cks1bP61025 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.93□□□□□ -0.34
Cks1bP61025 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.93□□□□□ -0.34
Cks1bP61025 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.93□□□□□ -0.34
Cks1bP61025 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cks1bP61025 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.93□□□□□ -0.34
Cks1bP61025 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.93□□□□□ -0.34
Cks1bP61025 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.93□□□□□ -0.34
Cks1bP61025 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.93□□□□□ -0.34
Cks1bP61025 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.93□□□□□ -0.34
Cks1bP61025 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.93□□□□□ -0.34
Cks1bP61025 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cks1bP61025 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Cks1bP61025 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.92□□□□□ -0.34
Cks1bP61025 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.92□□□□□ -0.34
Cks1bP61025 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cks1bP61025 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cks1bP61025 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms