Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.58■□□□□ 0.56
Tubgcp3P58854 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.57■□□□□ 0.56
Tubgcp3P58854 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Gm10849-201ENSMUST00000100397 618 ntBASIC18.57■□□□□ 0.56
Tubgcp3P58854 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tubgcp3P58854 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubgcp3P58854 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Gm8495-201ENSMUST00000188740 694 ntBASIC18.56■□□□□ 0.56
Tubgcp3P58854 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tubgcp3P58854 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.55■□□□□ 0.56
Tubgcp3P58854 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Grk6-206ENSMUST00000224995 2971 ntBASIC18.55■□□□□ 0.56
Tubgcp3P58854 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubgcp3P58854 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.54■□□□□ 0.56
Tubgcp3P58854 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Tubgcp3P58854 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Gm42569-201ENSMUST00000200539 472 ntBASIC18.54■□□□□ 0.56
Tubgcp3P58854 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tubgcp3P58854 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubgcp3P58854 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubgcp3P58854 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Tubgcp3P58854 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubgcp3P58854 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubgcp3P58854 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubgcp3P58854 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms